PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01390g00031.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 1338aa    MW: 150407 Da    PI: 6.9761
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01390g00031.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.23.2e-07770813147
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               + +WT+eE e   ++++ +G++ Wk+ a ++g  + + ++k+ w+ +
  Peaxi162Scf01390g00031.1 770 KRKWTEEEYEMVRKYHEVHGNK-WKALADELG--KHRFHVKDTWRRL 813
                               579*******************.********9..6788899888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF514451.9E-7286294IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.702.5E-9788291IPR013785Aldolase-type TIM barrel
PfamPF164991.1E-6189293IPR002241Glycoside hydrolase, family 27
CDDcd147922.42E-11089292IPR002241Glycoside hydrolase, family 27
PRINTSPR007402.0E-49106127IPR002241Glycoside hydrolase, family 27
PRINTSPR007402.0E-49141158IPR002241Glycoside hydrolase, family 27
PRINTSPR007402.0E-49168186IPR002241Glycoside hydrolase, family 27
PRINTSPR007402.0E-49233252IPR002241Glycoside hydrolase, family 27
PRINTSPR007402.0E-49254275IPR002241Glycoside hydrolase, family 27
SuperFamilySSF510113.6E-23283364No hitNo description
Gene3DG3DSA:2.60.40.11805.5E-25292363IPR013780Glycosyl hydrolase, all-beta
SMARTSM007170.014696767IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.2E-6699786IPR009057Homeodomain-like
PROSITE profilePS500907.178765814IPR017877Myb-like domain
SMARTSM007170.051769816IPR001005SANT/Myb domain
SuperFamilySSF466892.23E-8770831IPR009057Homeodomain-like
PfamPF139212.1E-11773831No hitNo description
Gene3DG3DSA:1.10.10.603.8E-8787826IPR009057Homeodomain-like
PROSITE profilePS500907.968815883IPR017877Myb-like domain
SMARTSM007170.41819885IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.9E-8827902IPR009057Homeodomain-like
SuperFamilySSF466896.53E-5863938IPR009057Homeodomain-like
PROSITE profilePS500907.758885938IPR017877Myb-like domain
SMARTSM0071716889940IPR001005SANT/Myb domain
Gene3DG3DSA:3.20.20.702.2E-1079971240IPR013785Aldolase-type TIM barrel
SuperFamilySSF514455.97E-889981246IPR017853Glycoside hydrolase superfamily
PfamPF164994.7E-4610041133IPR002241Glycoside hydrolase, family 27
CDDcd147921.66E-13110051246IPR002241Glycoside hydrolase, family 27
PROSITE patternPS00512010401056IPR000111Glycoside hydrolase family 27/36, conserved site
PfamPF164991.7E-3611491286IPR002241Glycoside hydrolase, family 27
Gene3DG3DSA:2.60.40.11802.1E-3512411337IPR013780Glycosyl hydrolase, all-beta
SuperFamilySSF510115.52E-2812411335No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0009620Biological Processresponse to fungus
GO:0009911Biological Processpositive regulation of flower development
GO:0009965Biological Processleaf morphogenesis
GO:0009505Cellular Componentplant-type cell wall
GO:0048046Cellular Componentapoplast
GO:0003677Molecular FunctionDNA binding
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
Sequence ? help Back to Top
Protein Sequence    Length: 1338 aa     Download sequence    Send to blast
FCSKLPEKPQ DEAINFDTTT MVLLVFVFGY NHGSSATAAT ADCYFKFHCQ NADSQEPLEQ  60
WPWPNSSNGL MQWYTLGFLL LDTNTSILGN MVPKGSTFPS GIKALADYVH NKGLKLGIYS  120
DAGTQTCSKE MPGSLGHEEQ DAKTFASWGV DYLKYDNCNN ENRSPRERYP TMSKALQNSG  180
RAIFYSLCEW GDDDPATWAS SVGNSWRTTG DISDNWDSMT SRADQNDKWA SYAGPGGWND  240
PDMLEVGNGG MTTAEYRSHF SIWALAKAPL IIGCDIRSMD ETTKEILSNK EVWAGPLSGK  300
RVAVVLWNRG SSKADITAYW SDIGLDSSTV VDARDLWSHS TKGSVKGQIS AGIESHDCKI  360
MVIGDEKVGM LRKEKKKSKK NNKNADISGL GMTMADAAET RKDSVKAEIE TKPTGGSDDR  420
DIKKKKKRED GTHPDKSNKD SDESVAKCVE KKKHKKLKRS HQDEQQIILD APMNTKTVAH  480
ASARERGDSE KVIKTLSEVS GGNAVEEIRR KKKSKKSNKH AVEGDLSLEE KKLCVGKGKK  540
ERDKVNMETK AAGESDVCDI KKNKEREGEK HPGKSTKDSD KDDLGSVEKK KRKKLKKSCR  600
DESETMHSIE DEQEAIVAKV NRGDISSTVK EIEEQSKTDT GKIRKKKKAT IGHSSEDPTH  660
EKSEKKVRFS GHVEIFPSSS DPSDEKHETE EENLLRGKRF STLEDEIVKE AVHKYIEMHN  720
LGEEGLEMIL NSRSHPELKG CWKEIGSAIP YRPYTSIYYR AQVLFRRSEK RKWTEEEYEM  780
VRKYHEVHGN KWKALADELG KHRFHVKDTW RRLKLTNRNK GQWTQEEYQT LFDLVNTDLR  840
LKLSEEKKSK HGMLRDNIAW TAISGNLSTR TDANCCLKWY DQLTSPMVSK GEWADTDDYR  900
LIDALFELDA SCIEDVDWDN LVDHRPGELC RKRWNQMVLH IGQYVNKSFS EQVEVLAKRY  960
RPELVEVREA WDTRPQPRQL IATSNSTAKM LILRNLLSNG LGQTPQMGWN SWNHFGCYID  1020
EKMIRETADA MVYTGLSSLG YEYINLDDCW AELNRDSQGN MVPKGSTFPS GIKALADYVH  1080
NKGLKLGIYS DAGTQTCSKE MPGSLGHEEQ DAKTFPSWGV DYLKYDNCNN ENRSPRERGD  1140
DNPATWASSV GNSWRTTGDI SDNWDSMTSR ADQNDKWASN AGPGGWNDPD MLEDGNGGMT  1200
TAEYRSHFSV WALAKAPLII GCDIRSMDET TKEILSNKEV IAVNQDKLGV QGKKVKSDSG  1260
LEVWAGPLSG KRVAVVLWNR GSSKADITAY WSDIGLDSST VVDARDLWSH STKGSIKGQI  1320
SASIESHDCK MYVLTPKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1uas_A0.08913361361alpha-galactosidase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1587594EKKKRKKL
2588596KKKRKKLKK
3589593KKRKK
4765771RRSEKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY3744370.0AY374437.1 Petunia x hybrida alpha-galactosidase mRNA, partial cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10291429
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-118MYB_related family protein